Basic Information
Locus ID:
SOLCI005181300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Mitogen-activated protein kinase kinase kinase YODA-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5073 | 20995 | 25676 | - | SOLCI005181300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 78,955.38 Da | 65.87 | 71.55 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 324 | 583 | 1.0E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 318 | 589 | 2.46E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 321 | 622 | 6.7E-79 | - |
| SMART | SM00220 | serkin_6 | 322 | 583 | 4.9E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 583 | 48.145363 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 351 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 611 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66850.1 | mitogen-activated protein kinase kinase kinase 5. member of MEKK subfamily | 0 |
| RefSeq | XP_010320358.1 | mitogen-activated protein kinase kinase kinase 5 isoform X1 [Solanum lycopersicum] | 0 |
| Q9C5H5 | Mitogen-activated protein kinase kinase kinase 5 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B0V2 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_018516 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg11946, jg17463, jg22803, jg40067 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23915 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027373 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g134510 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12972, Sbi_jg52895 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8965 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00010262 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl33986, Sgl39381 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000000322, gene:ENSEOMG00000003387 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0024710, CQ.Regalona.r1.6BG0026130 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30045730 |
| Apiaceae | Apium graveolens | 2 | Ag3G00169, Ag4G02783 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G017510, COCNU_14G010470 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103709183, gene-LOC103709223 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.2192.V1.1, AsparagusV1_07.2940.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G13088, Ftri18G32930 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G66850.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10003724m.g.v1.0, Thhalv10015359m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g29810.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB04g000300.2N, BniB06g015160.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1280 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G2454, Cgl05G1283 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno01g15450, gene.Cymno09g07250, gene.Cymno11g03230 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g05030, gene.Thate06g13170 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-1289, nbisL1-mrna-6621 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG02.2188, evm.TU.LG06.480 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00023968, Pov_00027665, Pov_00029301 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G05991 |
| Poaceae | Echinochloa crus-galli | 5 | AH01.10, AH03.106, CH01.604, CH03.159, Contig1201.1 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_3AG0214830, gene-QOZ80_3BG0259980 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0155570.1, HORVU.MOREX.r3.5HG0512750.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_010032, gene-QYE76_017042 |
| Poaceae | Oryza coarctata | 4 | Oco05G024400, Oco06G025320, Oco13G000660, Oco14G000710 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g55560.1, LOC_Os07g02780.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G070400, gene-BS78_02G012200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0107331, Pt_Chr0107368, Pt_Chr0303383 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G004390, Chr04G029280, Chr06G009870, Chr12G036680 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G635300 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG037660, gene_TRIDC2BG040280 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS2A02G264600.1, TraesCS2B02G277400.3 ... |
| Poaceae | Zea mays | 3 | Zm00001eb058410_P002, Zm00001eb117980_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35862 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g2718, Zma_g408, Zma_g4687 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG05.597, evm.TU.LG25.729 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g28660, gene.Posoc04g06290 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_3_RagTag.326, evm.TU.Scaffold_6_RagTag.1908 ... |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-17232, nbisL1-mrna-566, nbisL1-mrna-651 ... |
| Rhizophoraceae | Ceriops tagal | 4 | nbisL1-mrna-11170, nbisL1-mrna-17122, nbisL1-mrna-4566 ... |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-11878, nbisL1-mrna-20630, nbisL1-mrna-20631 ... |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000011l.1163, evm.TU.utg000018l.283 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00003291, Maker00007682, Maker00012423 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11443, nbisL1-mrna-15529, nbisL1-mrna-6454 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-17130, nbisL1-mrna-2261, nbisL1-mrna-3183 |
| Salicaceae | Populus euphratica | 5 | populus_peu14318, populus_peu14326, populus_peu23430 ... |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132604112, gene-LOC132622602, gene-LOC132623568 ... |
| Solanaceae | Solanum chilense | 4 | SOLCI003883400, SOLCI005181300, SOLCI006709300 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107005755, gene-LOC107011539, gene-LOC107011869 ... |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_2792 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G0502 |
| Zosteraceae | Zostera marina | 3 | Zosma01g00940.v3.1, Zosma06g07030.v3.1, Zosma06g07150.v3.1 |