Basic Information
Locus ID:
SOLCI005010700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4852 | 3529 | 6641 | - | SOLCI005010700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 46,478.60 Da | 32.47 | 84.21 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 112 | 388 | 5.69563E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 110 | 385 | 1.0E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 389 | 5.88E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 404 | 6.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 191 | 6.3E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 106 | 403 | 37.573132 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 234 | 246 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 112 | 144 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015082548.1 | probable serine/threonine-protein kinase PIX7 [Solanum pennellii] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B5M8 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_018006 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg33049 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10614 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014302 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g193850 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg25637, Sbi_jg31573, Sbi_jg9442 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19165 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011000 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41986, Sgl46760 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010592, gene:ENSEOMG00000034776 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0022360, CQ.Regalona.r1.8BG0020070 |
| Apiaceae | Apium graveolens | 1 | Ag3G02753 |
| Arecaceae | Cocos nucifera | 1 | COCNU_11G000490 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710113 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G28711, Ftri3G28294 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0589 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0609 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g04830 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g00840 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-76 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG07.645, evm.TU.LG07.646 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035254 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb6G32050, Lb6G32068 |
| Poaceae | Echinochloa crus-galli | 2 | AH06.395, CH06.522 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0510400 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0656410.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_028386 |
| Poaceae | Oryza coarctata | 2 | Oco11G003270, Oco12G003240 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g07230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G057900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402057 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr11G021980 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G255100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG015450, gene_TRIDC7BG004840 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G131300.1, TraesCS7B02G031900.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb086190_P001, Zm00001eb375480_P003 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31425 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g04470 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.63 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-12884 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16707 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16501 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.43 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014514 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16730 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14468 |
| Salicaceae | Populus euphratica | 2 | populus_peu05736, populus_peu11109 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132603143 |
| Solanaceae | Solanum chilense | 1 | SOLCI005010700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107026184 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.12168_chr02_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1270 |