Basic Information
Locus ID:
SOLCI004988400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4822 | 40310 | 42286 | - | SOLCI004988400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 61,792.90 Da | 35.80 | 95.82 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 272 | 523 | 9.1E-30 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 144 | 2.68E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 247 | 524 | 1.39E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 233 | 344 | 6.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 345 | 541 | 2.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 156 | 1.6E-23 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 270 | 528 | 25.700571 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48380.1 | BAK1-interacting receptor-like kinase 1. Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. | 0 |
| RefSeq | XP_015081747.1 | probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Solanum pennellii] | 0 |
| Q9ASS4 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana OX=3702 GN=At5g48380 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B9Z2 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_017932 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 2 | gene-LOC132601924, gene-LOC132602035 |
| Solanaceae | Solanum chilense | 1 | SOLCI004988400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107006670, gene-LOC107025476 |