Basic Information
Locus ID:
SOLCI004800600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold458 | 122628 | 127105 | - | SOLCI004800600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 47,966.77 Da | 38.65 | 114.08 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 85 | 242 | 4.6E-20 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 277 | 416 | 1.9E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 266 | 420 | 4.2E-19 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 116 | 255 | 7.3E-15 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 58 | 419 | 6.3E-119 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 68 | 419 | 2.5E-104 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_015067565.1 | vacuolar cation/proton exchanger 3-like isoform X3 [Solanum pennellii] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2C6G6 | Vacuolar cation/proton exchanger OS=Solanum chilense OX=4083 GN=EJD97_017291 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology