Basic Information
Locus ID:
SOLCI004774300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold455 | 71527 | 76993 | + | SOLCI004774300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 106,289.54 Da | 36.31 | 90.72 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 635 | 902 | 1.30436E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 632 | 899 | 2.0E-49 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 63 | 1.7E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 615 | 911 | 7.79E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 394 | 1.87E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 704 | 3.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 705 | 933 | 5.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 183 | 2.1E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 433 | 1.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 282 | 5.3E-17 | IPR032675 |
| SMART | SM00220 | serkin_6 | 629 | 903 | 5.5E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 629 | 903 | 39.071335 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 635 | 657 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 749 | 761 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015089261.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Solanum pennellii] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CE22 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_017160 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology