Basic Information
Locus ID:
SOLCI004729800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4496 | 16003 | 17190 | + | SOLCI004729800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 43,412.28 Da | 38.96 | 107.39 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 146 | 166 | 0.21 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 3.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 89 | 367 | 1.22E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 379 | 3.6E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 191 | 9.3E-33 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_015086521.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Solanum pennellii] | 0 |
| TrEMBL | A0A6N2B3Y5 | LRRNT_2 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_016974 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology