Basic Information
Locus ID:
SOLCI004691400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4443 | 44002 | 49723 | - | SOLCI004691400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 79,327.91 Da | 53.46 | 74.56 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 14 | 269 | 5.23472E-115 | - |
| Pfam | PF00069 | Protein kinase domain | 15 | 268 | 3.5E-60 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 311 | 3.14E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 94 | 1.6E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 275 | 8.7E-54 | - |
| SMART | SM00220 | serkin_6 | 15 | 269 | 4.2E-69 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 273 | 43.650753 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 136 | 148 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 561 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_004249275.1 | serine/threonine-protein kinase Nek6-like isoform X2 [Solanum lycopersicum] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6N2B8K9 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_016830 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology