Basic Information
Locus ID:
SOLCI004502700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4223 | 83842 | 89383 | + | SOLCI004502700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 138,137.25 Da | 58.93 | 72.11 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 186 | 279 | 4.9235E-46 | - |
| CDD | cd13999 | STKc_MAP3K-like | 960 | 1220 | 1.22843E-104 | - |
| Pfam | PF00564 | PB1 domain | 198 | 281 | 1.4E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 956 | 1220 | 3.1E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 198 | 284 | 1.73E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 943 | 1219 | 1.52E-74 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 201 | 281 | 1.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1042 | 1234 | 5.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 947 | 1041 | 7.9E-26 | - |
| SMART | SM00666 | PB1_new | 197 | 282 | 6.5E-26 | IPR000270 |
| SMART | SM00220 | serkin_6 | 954 | 1227 | 1.2E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 954 | 1227 | 39.876972 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1082 | 1094 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 960 | 981 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1191 | 1213 | 6.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1076 | 1094 | 6.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1147 | 1169 | 6.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1036 | 1049 | 6.1E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 471 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 932 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_015086682.1 | uncharacterized protein LOC107029747 [Solanum pennellii] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B5R5 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_016085 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology