HalophFGD

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Basic Information
Locus ID: SOLCI004455400
Species & Taxonomic ID: Solanum chilense & 4083
Genome Assembly: GCA_006013705.1
Description: F-Box protein
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold4177 35758 36840 + SOLCI004455400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.67 26,408.86 Da 45.38 89.64 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 27 119 1.6E-13 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015075269.1 F-box protein At2g23160-like [Solanum pennellii] 0
TrEMBL A0A6N2B618 FBA_3 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_015890 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Solanaceae Lycium barbarum 5 gene-LOC132607706, gene-LOC132639922, gene-LOC132639923 ...
gene-LOC132642836, gene-LOC132642839
Solanaceae Solanum chilense 2 SOLCI000279300, SOLCI004455400
Solanaceae Solanum pennellii 1 gene-LOC107019227
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