Basic Information
Locus ID:
SOLCI004430100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
casein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold415 | 71984 | 79941 | + | SOLCI004430100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 77,419.95 Da | 45.52 | 71.59 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 129 | 404 | 1.0497E-127 | - |
| Pfam | PF00069 | Protein kinase domain | 129 | 416 | 2.9E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 129 | 406 | 2.32E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 101 | 452 | 5.3E-80 | - |
| SMART | SM00220 | serkin_6 | 129 | 426 | 2.8E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 129 | 414 | 23.849018 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 135 | 167 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 96 | - | - |
| Coils | Coil | Coil | 44 | 92 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_049389055.1 | casein kinase 1-like protein HD16 [Solanum stenotomum] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CFN9 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_015752 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology