Basic Information
Locus ID:
SOLCI004418800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Ubiquitin-2 like Rad60 SUMO-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold414 | 101675 | 102962 | + | SOLCI004418800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 11,628.03 Da | 59.28 | 61.40 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 20 | 91 | 3.6E-15 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 8 | 96 | 3.54E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 96 | 7.3E-25 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 20 | 96 | 12.596278 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_010326829.1 | small ubiquitin-related modifier 2-like isoform X2 [Solanum lycopersicum] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CAI3 | Ubiquitin-like domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_015700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology