Basic Information
Locus ID:
SOLCI004339000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4046 | 16587 | 24271 | + | SOLCI004339000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 171,678.03 Da | 50.10 | 85.54 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 1064 | 1126 | - | - |
| Coils | Coil | Coil | 1311 | 1352 | - | - |
| Coils | Coil | Coil | 1381 | 1408 | - | - |
| Coils | Coil | Coil | 1180 | 1207 | - | - |
| Coils | Coil | Coil | 1250 | 1270 | - | - |
| Coils | Coil | Coil | 846 | 866 | - | - |
| Coils | Coil | Coil | 114 | 134 | - | - |
| Coils | Coil | Coil | 956 | 997 | - | - |
| Coils | Coil | Coil | 51 | 85 | - | - |
| Coils | Coil | Coil | 377 | 397 | - | - |
| Coils | Coil | Coil | 900 | 934 | - | - |
| Coils | Coil | Coil | 679 | 699 | - | - |
| Coils | Coil | Coil | 1155 | 1178 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_015060554.1 | kinesin-like protein KIN-12C isoform X1 [Solanum pennellii] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BBS6 | Phragmoplast orienting kinesin-1 (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_015418 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology