Basic Information
Locus ID:
SOLCI004292600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4 | 83467 | 87045 | - | SOLCI004292600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 129,981.27 Da | 33.79 | 100.72 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 694 | 752 | 3.3E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 376 | 415 | 1.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 307 | 367 | 1.8E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 505 | 527 | 0.89 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 254 | 270 | 0.34 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 453 | 469 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 84 | 7.9E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 890 | 1160 | 1.9E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 870 | 1160 | 2.43E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 369 | 5.67E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 662 | 784 | 3.57E-26 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 302 | 597 | 5.1E-58 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 608 | 665 | 1.4E-268 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 184 | 1.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 785 | 1.4E-268 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 851 | 964 | 4.7E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 965 | 1180 | 2.9E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 330 | 353 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 739 | 762 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 691 | 714 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 33.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 889 | 1163 | 4.5E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 478 | 502 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 504 | 527 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 379 | 402 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 255 | 280 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 305 | 329 | 16.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 257 | 278 | 8.2048 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 889 | 1165 | 37.233917 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 182 | 203 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 332 | 354 | 7.33462 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1011 | 1023 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 895 | 918 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_004244326.1 | receptor-like protein kinase BRI1-like 3 [Solanum lycopersicum] | 0 |
| Q9LJF3 | Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CLF7 | non-specific serine/threonine protein kinase OS=Solanum chilense OX=4083 GN=EJD97_015224 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology