Basic Information
Locus ID:
SOLCI004273600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
EGY1
Description:
zinc metalloprotease EGY1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3978 | 65611 | 74068 | + | SOLCI004273600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 58,380.59 Da | 39.57 | 96.23 | 0.18 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35220.1 | Peptidase M50 family protein. Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis. | 0 |
| RefSeq | NP_001299816.1 | lutescent 2 [Solanum lycopersicum] | 0 |
| Q949Y5 | Probable zinc metalloprotease EGY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EGY1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2B7G5 | Zinc metalloprotease EGY1, chloroplastic OS=Solanum chilense OX=4083 GN=EJD97_015151 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg15735 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2365 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah002795 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g109720 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12951, Sbi_jg52917 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8941 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026032 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl31026, Sgl32331, Sgl36395, Sgl36397 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006957, gene:ENSEOMG00000021080 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0012190, CQ.Regalona.r1.5BG0012730 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30093180 |
| Apiaceae | Apium graveolens | 3 | Ag2G01588, Ag2G01589, Ag3G00730 |
| Arecaceae | Cocos nucifera | 1 | scaffold008709G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708305 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.3305.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri16G24794, Ftri2G00785 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G35220.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003446m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g07090.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g060950.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1441 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1472 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g13810 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0788s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g40140 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.2002 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000367 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G25338, Lb4G25895 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.167, BH03.3918, CH01.433 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0213060, gene-QOZ80_3BG0258210 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0517590.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_061439 |
| Poaceae | Oryza coarctata | 2 | Oco05G025750, Oco06G026620 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g57840.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G054400 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0105337 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G003100, Chr04G030290, Chr12G034970 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G672000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG062020, gene_TRIDC5BG066200 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G429300.1, TraesCS5B02G431300.2 ... |
| Poaceae | Zea mays | 2 | Zm00001eb060350_P002, Zm00001eb213150_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-16436 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2600 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.470, evm.TU.LG26.566 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g01160 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1803 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-3001, nbisL1-mrna-3167 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-360 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13904 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.217 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005057 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12819 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16382 |
| Salicaceae | Populus euphratica | 2 | populus_peu16127, populus_peu16128 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132607277 |
| Solanaceae | Solanum chilense | 1 | SOLCI004273600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107002481 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13255 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G3058 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06370.v3.1 |