Basic Information
Locus ID:
SOLCI004273000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3978 | 24782 | 26760 | - | SOLCI004273000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 31,646.81 Da | 22.96 | 75.54 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 122 | 2.80138E-40 | - |
| CDD | cd04216 | Phytocyanin | 135 | 232 | 1.0643E-38 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 112 | 1.7E-24 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 145 | 222 | 1.3E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 134 | 232 | 1.1E-28 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 122 | 1.49E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 132 | 234 | 8.3E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 127 | 1.4E-33 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 124 | 38.885555 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 135 | 234 | 37.149937 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31050.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_027768225.1 | blue copper protein-like [Solanum pennellii] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BCN1 | Phytocyanin domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_015147 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology