Basic Information
Locus ID:
SOLCI004265800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine-rich repeat receptor-like protein kinase TDR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3969 | 35096 | 40594 | + | SOLCI004265800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 104,071.76 Da | 33.04 | 96.23 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 73 | 2.1E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 364 | 381 | 0.62 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 534 | 554 | 0.8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 102 | 120 | 0.99 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 713 | 917 | 9.3E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 287 | 330 | 6.8E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 918 | 1.75E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 386 | 3.74E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 310 | 621 | 3.09E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 336 | 3.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 635 | 2.3E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 145 | 3.6E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 937 | 8.5E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 237 | 9.9E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 707 | 789 | 1.1E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 364 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 937 | 7.2E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 938 | 36.343475 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015074895.1 | leucine-rich repeat receptor-like protein kinase TDR [Solanum pennellii] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B7H5 | Protein kinase domain-containing protein (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_015130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology