Basic Information
Locus ID:
SOLCI004079300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3756 | 22153 | 27211 | + | SOLCI004079300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 77,653.08 Da | 44.70 | 81.27 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 370 | 663 | 1.70871E-123 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 339 | 649 | 3.3E-92 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 370 | 675 | 1.6E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 375 | 668 | 1.5E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 180 | - | - |
| Coils | Coil | Coil | 301 | 321 | - | - |
| Coils | Coil | Coil | 249 | 269 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_004236640.1 | probable galacturonosyltransferase 4 isoform X1 [Solanum lycopersicum] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2B9M4 | Hexosyltransferase OS=Solanum chilense OX=4083 GN=EJD97_014479 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology