Basic Information
Locus ID:
SOLCI003855800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3517 | 94590 | 97255 | - | SOLCI003855800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 63,147.32 Da | 29.37 | 92.37 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 29 | 188 | 1.63924E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 389 | 570 | 3.05952E-87 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 433 | 558 | 3.3E-14 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 26 | 192 | 1.1E-35 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 223 | 340 | 3.1E-22 | IPR012000 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 218 | 365 | 2.4E-33 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 391 | 582 | 3.75E-41 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 26 | 202 | 6.24E-44 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 213 | 375 | 1.4E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 24 | 198 | 1.6E-60 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 382 | 569 | 1.2E-55 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 23 | 582 | 8.7E-209 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_004232952.1 | pyruvate decarboxylase 1 [Solanum lycopersicum] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BAG9 | pyruvate decarboxylase OS=Solanum chilense OX=4083 GN=EJD97_013709 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology