Basic Information
Locus ID:
SOLCI003839000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold350 | 64631 | 66502 | + | SOLCI003839000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 64,789.92 Da | 46.93 | 97.50 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 83 | 6.54E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 192 | 371 | 3.77E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 111 | 474 | 5.0E-14 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 76 | 9.9E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G44950.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_015069843.1 | uncharacterized protein LOC107014443 [Solanum pennellii] | 0 |
| Q9FLA2 | Putative F-box/FBD/LRR-repeat protein At5g44950 OS=Arabidopsis thaliana OX=3702 GN=At5g44950 PE=4 SV=1 | 0 | |
| TrEMBL | A0A6N2CGC7 | F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_013647 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology