Basic Information
Locus ID:
SOLCI003808600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Serine threonine-protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3475 | 27973 | 30357 | + | SOLCI003808600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 85,410.52 Da | 37.33 | 85.69 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 485 | 767 | 4.5E-44 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 160 | 186 | 2.2E-5 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 117 | 313 | 7.85E-20 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 464 | 770 | 2.97E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 564 | 1.7E-33 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 33 | 311 | 3.7E-25 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 565 | 786 | 6.7E-50 | - |
| SMART | SM00220 | serkin_6 | 484 | 774 | 1.2E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 484 | 774 | 36.513081 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 615 | 627 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 490 | 512 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_004240226.1 | putative serine/threonine-protein kinase-like protein CCR3 [Solanum lycopersicum] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BD75 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_013551 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology