Basic Information
Locus ID:
SOLCI003747400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3411 | 7885 | 12841 | + | SOLCI003747400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 68,488.91 Da | 41.89 | 94.12 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 7.0E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 294 | 562 | 9.3E-44 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 195 | 7.94E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 566 | 8.63E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 212 | 4.0E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 368 | 3.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 369 | 579 | 2.2E-62 | - |
| SMART | SM00220 | serkin_6 | 293 | 564 | 3.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 568 | 37.21978 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 299 | 321 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 415 | 427 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015065751.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Solanum pennellii] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BB93 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_013317 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology