Basic Information
Locus ID:
SOLCI003707500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Mitogen-activated protein kinase kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3373 | 26647 | 30095 | - | SOLCI003707500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 52,831.65 Da | 38.26 | 84.53 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05903 | PPPDE putative peptidase domain | 44 | 105 | 3.7E-7 | IPR008580 |
| Pfam | PF00069 | Protein kinase domain | 120 | 385 | 3.5E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 118 | 433 | 3.83E-63 | IPR011009 |
| Gene3D | G3DSA:3.90.1720.30 | PPPDE domains | 41 | 108 | 9.6E-10 | IPR042266 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 435 | 8.3E-59 | - |
| SMART | SM00220 | serkin_6 | 119 | 385 | 3.0E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 119 | 385 | 36.555485 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 240 | 252 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 125 | 150 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 455 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G36950.1 | mitogen-activated protein kinase kinase kinase 21. member of MEKK subfamily | 0 |
| RefSeq | XP_025887613.1 | mitogen-activated protein kinase kinase kinase 18-like [Solanum lycopersicum] | 0 |
| Q9SND6 | Mitogen-activated protein kinase kinase kinase 20 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BE52 | Protein kinase domain-containing protein (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_013184 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 3 | gene-LOC132637195, gene-LOC132637196, gene-LOC132638225 |
| Solanaceae | Solanum chilense | 4 | SOLCI002050200, SOLCI002549500, SOLCI003126700 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107027802, gene-LOC107027843, gene-LOC114077897 ... |