Basic Information
Locus ID:
SOLCI003649400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3315 | 85124 | 90527 | - | SOLCI003649400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 79,278.71 Da | 46.62 | 94.57 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 103 | 162 | 1.7E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 439 | 687 | 3.4E-21 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 2.7E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 687 | 2.93E-34 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 182 | 2.33E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 507 | 697 | 2.9E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 401 | 506 | 3.3E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 192 | 9.0E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 424 | 691 | 16.428667 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004231550.1 | protein MALE DISCOVERER 2 isoform X2 [Solanum lycopersicum] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BC87 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012962 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology