Basic Information
Locus ID:
SOLCI003627400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3295 | 98113 | 103889 | + | SOLCI003627400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 89,858.53 Da | 45.25 | 87.03 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 175 | 309 | 3.7E-22 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 523 | 788 | 1.3E-119 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 167 | 302 | 7.45E-21 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 150 | 391 | 2.1E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 68 | 791 | 1.4E-203 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 171 | 402 | 27.9526 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 83 | - | - |
| Coils | Coil | Coil | 145 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_015082300.1 | translocase of chloroplast 90, chloroplastic [Solanum pennellii] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BC56 | AIG1-type G domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012896 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology