Basic Information
Locus ID:
SOLCI003620400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3289 | 39443 | 46847 | - | SOLCI003620400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 89,629.09 Da | 47.44 | 79.48 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 290 | 1.35993E-101 | - |
| Pfam | PF00183 | Hsp90 protein | 272 | 772 | 7.5E-194 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 267 | 4.6E-12 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 3.01E-61 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 623 | 744 | 2.62E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 343 | 601 | 5.61E-91 | IPR020568 |
| Gene3D | G3DSA:3.30.230.80 | - | 341 | 518 | 4.5E-75 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 519 | 604 | 5.6E-33 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 71 | 315 | 2.7E-93 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 605 | 748 | 1.6E-52 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 107 | 269 | 2.7E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 61 | 786 | 1.2E-239 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 4.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 257 | 274 | 4.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 4.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 202 | 224 | 4.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 4.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 4.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 4.0E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 75 | 745 | 26.330742 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 325 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_015076099.1 | heat shock protein 90-5, chloroplastic [Solanum pennellii] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BC93 | HATPase_c domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012880 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology