Basic Information
Locus ID:
SOLCI003519000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3198 | 34736 | 39047 | + | SOLCI003519000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 63,030.48 Da | 55.41 | 74.28 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 145 | 223 | 6.93313E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 263 | 356 | 2.5E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 149 | 237 | 9.1E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 439 | 550 | 4.9E-8 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 150 | 237 | 9.42E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 273 | 1.2E-17 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 426 | 551 | 1.2E-5 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 274 | 378 | 3.8E-14 | - |
| SMART | SM00225 | BTB_4 | 115 | 240 | 4.1E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 255 | 357 | 7.6E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 140 | 209 | 13.467028 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | NP_001334246.1 | BTB/POZ domain-containing protein POB1 [Solanum lycopersicum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2BFI2 | BTB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012539 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology