Basic Information
Locus ID:
SOLCI003510600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3190 | 15553 | 16580 | + | SOLCI003510600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 16,705.15 Da | 17.57 | 94.90 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 23 | 120 | 9.10905E-42 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 33 | 114 | 1.4E-23 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 22 | 121 | 3.93E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 126 | 1.3E-34 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 23 | 122 | 34.354446 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_004252640.1 | mavicyanin-like [Solanum lycopersicum] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BD84 | Phytocyanin domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012502 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology