Basic Information
Locus ID:
SOLCI003422200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3101 | 3110 | 6706 | + | SOLCI003422200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 37,349.62 Da | 47.34 | 65.70 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 72 | 340 | 9.8E-93 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 227 | 330 | 2.4E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 224 | 342 | 7.2E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 229 | 331 | 25.674019 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 193 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | NP_001265888.2 | auxin-responsive protein IAA9 [Solanum lycopersicum] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BDX8 | Auxin-responsive protein OS=Solanum chilense OX=4083 GN=EJD97_012159 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology