Basic Information
Locus ID:
SOLCI003349100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
PAS domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3033 | 22290 | 30620 | + | SOLCI003349100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 80,749.73 Da | 42.58 | 71.30 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 458 | 703 | 4.94722E-125 | - |
| CDD | cd00130 | PAS | 93 | 183 | 6.65035E-11 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 453 | 702 | 1.4E-66 | IPR001245 |
| Pfam | PF00989 | PAS fold | 74 | 182 | 4.6E-11 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 74 | 183 | 7.68E-16 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 702 | 1.75E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 446 | 529 | 3.9E-26 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 70 | 197 | 2.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 531 | 712 | 6.3E-59 | - |
| SMART | SM00220 | serkin_6 | 452 | 708 | 2.0E-51 | IPR000719 |
| SMART | SM00091 | pas_2 | 72 | 139 | 2.4E-8 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 74 | 184 | 9.3E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 93 | 141 | 12.034856 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 709 | 41.91227 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 458 | 479 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 571 | 583 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 675 | 697 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 565 | 583 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 526 | 539 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 612 | 622 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 631 | 653 | 7.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 298 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_015083358.1 | putative proline-rich receptor-like protein kinase PERK11 isoform X1 [Solanum pennellii] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BGE1 | Serine/threonine-protein kinase CTR1 OS=Solanum chilense OX=4083 GN=EJD97_011871 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology