Basic Information
Locus ID:
SOLCI003313800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold300 | 30513 | 33387 | - | SOLCI003313800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 42,998.51 Da | 33.26 | 92.44 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 52 | 319 | 2.62431E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 47 | 249 | 1.2E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 317 | 5.8E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 121 | 5.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 122 | 332 | 2.3E-59 | - |
| SMART | SM00220 | serkin_6 | 46 | 317 | 1.6E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 321 | 39.028934 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 74 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004248347.1 | cold-responsive protein kinase 1 [Solanum lycopersicum] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CCW6 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_011748 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology