Basic Information
Locus ID:
SOLCI003282700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold298 | 68043 | 70790 | + | SOLCI003282700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 43,873.27 Da | 39.77 | 62.49 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 197 | 6.1E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 216 | 3.79E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 64 | 221 | 1.9E-29 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 216 | 30.075134 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 254 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_004231842.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Solanum lycopersicum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CEV5 | NAC domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_011647 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology