Basic Information
Locus ID:
SOLCI003282600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold298 | 57658 | 61059 | + | SOLCI003282600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 39,858.48 Da | 44.49 | 85.10 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 33 | 287 | 5.30298E-108 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 30 | 287 | 1.6E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 315 | 2.7E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 15 | 106 | 9.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 298 | 2.1E-51 | - |
| SMART | SM00220 | serkin_6 | 27 | 291 | 3.0E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 27 | 291 | 42.703773 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 33 | 54 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 258 | 280 | 2.2E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 141 | 159 | 2.2E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 215 | 237 | 2.2E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 103 | 116 | 2.2E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 336 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004231843.1 | serine/threonine-protein kinase STY13 isoform X1 [Solanum lycopersicum] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2CH17 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_011646 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology