Basic Information
Locus ID:
SOLCI003110600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2816 | 9714 | 20779 | - | SOLCI003110600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 91,870.31 Da | 52.73 | 82.45 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 561 | 809 | 1.1355E-130 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 165 | 370 | 1.3E-78 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 556 | 809 | 4.4E-70 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 540 | 809 | 3.78E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 634 | 817 | 2.7E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 548 | 633 | 8.6E-38 | - |
| SMART | SM00220 | serkin_6 | 555 | 813 | 1.2E-65 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 813 | 44.809738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 676 | 688 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 561 | 582 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 780 | 802 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 670 | 688 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 717 | 727 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 736 | 758 | 1.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 629 | 642 | 1.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 480 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_010327687.1 | ethylene-inducible CTR1-like protein kinase isoform X1 [Solanum lycopersicum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BIQ4 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_011108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology