Basic Information
Locus ID:
SOLCI003029900
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold275 | 22422 | 29055 | - | SOLCI003029900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 124,489.53 Da | 43.32 | 74.78 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 558 | 904 | 7.41935E-111 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 563 | 895 | 7.7E-16 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 535 | 927 | 2.59E-60 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 197 | 543 | 1.04E-23 | IPR036322 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 539 | 936 | 1.6E-103 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 65 | 293 | 1.2E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 294 | 538 | 2.5E-6 | IPR015943 |
| SMART | SM00320 | WD40_4 | 414 | 452 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 187 | 225 | 2.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 235 | 273 | 0.27 | IPR001680 |
| SMART | SM00128 | i5p_5 | 556 | 910 | 6.3E-86 | IPR000300 |
| SMART | SM00320 | WD40_4 | 454 | 491 | 26.0 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 934 | 1085 | 9.707193 | IPR000535 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1080 | 1120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_015060217.1 | type I inositol polyphosphate 5-phosphatase 12-like isoform X1 [Solanum pennellii] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2CHH5 | MSP domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_010830 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology