Basic Information
Locus ID:
SOLCI003006800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Hippocampus abundant
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2726 | 30715 | 35638 | - | SOLCI003006800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 44,892.40 Da | 43.66 | 112.51 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 21 | 390 | 3.67285E-50 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 30 | 350 | 4.8E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 29 | 395 | 6.54E-33 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 22 | 389 | 6.7E-30 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 395 | 11.866656 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_015057839.1 | hippocampus abundant transcript-like protein 1 isoform X1 [Solanum pennellii] | 0 |
| TrEMBL | A0A6N2BN57 | MFS domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_010737 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology