Basic Information
Locus ID:
SOLCI002989300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2711 | 41 | 4101 | - | SOLCI002989300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 74,859.22 Da | 38.57 | 97.86 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 7.9E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 676 | 8.4E-40 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 3.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 238 | 2.3E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 676 | 1.73E-58 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 188 | 1.0E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 258 | 1.2E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 682 | 1.2E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 490 | 4.1E-26 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 166 | 7.165205 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 677 | 30.053843 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004245714.1 | LRR receptor-like serine/threonine-protein kinase GSO1 [Solanum lycopersicum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2BMJ5 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_010653 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology