Basic Information
Locus ID:
SOLCI002832800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2585 | 16101 | 22890 | + | SOLCI002832800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 48,145.60 Da | 43.11 | 112.39 | 0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 279 | 419 | 2.2E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 245 | 3.8E-23 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 267 | 423 | 3.7E-17 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 119 | 263 | 1.7E-15 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 74 | 422 | 2.1E-103 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 58 | 422 | 1.4E-122 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_027769232.1 | vacuolar cation/proton exchanger 3-like isoform X2 [Solanum pennellii] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BIB7 | Vacuolar cation/proton exchanger OS=Solanum chilense OX=4083 GN=EJD97_010051 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology