Basic Information
Locus ID:
SOLCI002697400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Phragmoplast orienting kinesin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2480 | 8737 | 22662 | + | SOLCI002697400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 323,878.91 Da | 48.24 | 89.37 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 206 | 537 | 2.9E-108 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 200 | 570 | 5.32E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 196 | 549 | 2.3E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 198 | 545 | 2.3E-160 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 200 | 537 | 120.674789 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 433 | 444 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 487 | 508 | 3.3E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 434 | 452 | 3.3E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 401 | 418 | 3.3E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 272 | 293 | 3.3E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1388 | 1407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2526 | 2551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2532 | 2551 | - | - |
| Coils | Coil | Coil | 2223 | 2257 | - | - |
| Coils | Coil | Coil | 2384 | 2481 | - | - |
| Coils | Coil | Coil | 1941 | 1968 | - | - |
| Coils | Coil | Coil | 2677 | 2732 | - | - |
| Coils | Coil | Coil | 1184 | 1218 | - | - |
| Coils | Coil | Coil | 1321 | 1348 | - | - |
| Coils | Coil | Coil | 2335 | 2355 | - | - |
| Coils | Coil | Coil | 2795 | 2815 | - | - |
| Coils | Coil | Coil | 1605 | 1639 | - | - |
| Coils | Coil | Coil | 1860 | 1880 | - | - |
| Coils | Coil | Coil | 2500 | 2527 | - | - |
| Coils | Coil | Coil | 639 | 666 | - | - |
| Coils | Coil | Coil | 1064 | 1119 | - | - |
| Coils | Coil | Coil | 937 | 971 | - | - |
| Coils | Coil | Coil | 2014 | 2041 | - | - |
| Coils | Coil | Coil | 2742 | 2762 | - | - |
| Coils | Coil | Coil | 2147 | 2181 | - | - |
| Coils | Coil | Coil | 806 | 840 | - | - |
| Coils | Coil | Coil | 544 | 571 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_010315270.1 | kinesin-like protein KIN-12D [Solanum lycopersicum] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BMT5 | Kinesin motor domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_009551 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology