Basic Information
Locus ID:
SOLCI002658200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2450 | 25812 | 29411 | + | SOLCI002658200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 77,414.92 Da | 46.73 | 74.71 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 210 | 352 | 4.9E-66 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 411 | 550 | 2.1E-63 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 1.2E-61 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 415 | 554 | 1.01E-21 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 146 | 4.58E-22 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 218 | 356 | 1.44E-22 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 145 | 1.0E-14 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 208 | 356 | 2.5E-16 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 419 | 536 | 1.3E-13 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_004232247.2 | uncharacterized protein LOC101261868 [Solanum lycopersicum] | 0 |
| TrEMBL | A0A6N2BKH3 | Actin cross-linking OS=Solanum chilense OX=4083 GN=EJD97_009397 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology