Basic Information
Locus ID:
SOLCI002608400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2411 | 38943 | 42019 | - | SOLCI002608400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 69,165.52 Da | 38.03 | 98.09 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 365 | 628 | 1.49948E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 362 | 623 | 1.3E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 57 | 2.8E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 110 | 169 | 1.9E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 628 | 1.04E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 203 | 9.07E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 134 | 222 | 1.6E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 433 | 3.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 133 | 3.4E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 633 | 4.1E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 634 | 33.17746 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_004241646.1 | probable inactive receptor kinase At1g48480 [Solanum lycopersicum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BIU6 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_009191 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology