Basic Information
Locus ID:
SOLCI002574600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2389 | 13367 | 21047 | + | SOLCI002574600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 107,327.00 Da | 42.53 | 84.19 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 690 | 938 | 6.76934E-128 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 288 | 496 | 2.8E-73 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 684 | 938 | 2.2E-65 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 659 | 937 | 2.46E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 948 | 5.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 761 | 4.3E-35 | - |
| SMART | SM00220 | serkin_6 | 684 | 942 | 1.7E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 684 | 942 | 43.608349 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 690 | 711 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 805 | 817 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 865 | 887 | 7.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 758 | 771 | 7.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 799 | 817 | 7.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 909 | 931 | 7.7E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 47 | - | - |
| Coils | Coil | Coil | 228 | 248 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.2 | - | 0 |
| RefSeq | XP_004238541.1 | serine/threonine-protein kinase CTR1 [Solanum lycopersicum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BRI8 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_009094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology