Basic Information
Locus ID:
SOLCI002556400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2379 | 5901 | 7319 | + | SOLCI002556400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 51,725.98 Da | 40.29 | 81.93 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 18 | 95 | 3.49534E-19 | - |
| Pfam | PF02214 | BTB/POZ domain | 18 | 100 | 1.5E-12 | IPR003131 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 134 | 356 | 8.63E-7 | IPR011044 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 101 | 3.92E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 106 | 2.5E-19 | IPR011333 |
| SMART | SM00225 | BTB_4 | 16 | 113 | 9.6E-5 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09030.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_027767510.1 | BTB/POZ domain-containing protein At3g09030 [Solanum pennellii] | 0 |
| Q9S7R7 | Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BTE2 | BTB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_009026 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology