Basic Information
Locus ID:
SOLCI002526200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2352 | 35304 | 39346 | - | SOLCI002526200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 43,375.18 Da | 34.67 | 80.03 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 94 | 362 | 8.36666E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 90 | 361 | 1.3E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 361 | 2.32E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 188 | 380 | 5.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 171 | 5.0E-19 | - |
| SMART | SM00220 | serkin_6 | 88 | 365 | 9.0E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 88 | 365 | 41.219704 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 229 | 241 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 333 | 355 | 2.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 185 | 198 | 2.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 223 | 241 | 2.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 289 | 311 | 2.3E-15 | IPR001245 |
| Coils | Coil | Coil | 16 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004236113.1 | serine/threonine-protein kinase STY13 [Solanum lycopersicum] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BRT7 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008936 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology