Basic Information
Locus ID:
SOLCI002522900
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein STRUBBELIG-RECEPTOR FAMILY 3-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold235 | 158107 | 168431 | - | SOLCI002522900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 86,419.12 Da | 52.83 | 90.72 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 506 | 777 | 2.3E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 178 | 1.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 238 | 1.15E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 777 | 1.48E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 582 | 791 | 5.4E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 263 | 4.1E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 473 | 580 | 1.1E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 503 | 781 | 35.043144 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 399 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_010323715.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Solanum lycopersicum] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CI15 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology