Basic Information
Locus ID:
SOLCI002445600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2293 | 65064 | 67157 | - | SOLCI002445600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 62,258.69 Da | 51.01 | 63.44 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 92 | 362 | 5.95968E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 88 | 356 | 7.8E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 376 | 1.27E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 163 | 371 | 2.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 161 | 7.3E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 362 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 92 | 114 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 208 | 220 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 490 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07070.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015072998.1 | probable serine/threonine-protein kinase PBL25 [Solanum pennellii] | 0 |
| Q9SFT7 | Probable serine/threonine-protein kinase PBL26 OS=Arabidopsis thaliana OX=3702 GN=PBL26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BS67 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008642 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132615845 |
| Solanaceae | Solanum chilense | 1 | SOLCI002445600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017246 |