Basic Information
Locus ID:
SOLCI002444300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2292 | 24299 | 38933 | + | SOLCI002444300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 184,162.88 Da | 45.20 | 77.69 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 202 | 454 | 1.11839E-95 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1328 | 1588 | 1.05093E-131 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 199 | 451 | 8.0E-27 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1366 | 1532 | 1.3E-34 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1535 | 1586 | 4.8E-8 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 253 | 421 | 4.19E-26 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1301 | 1588 | 9.15E-78 | - |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 205 | 445 | 4.58E-8 | IPR027410 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 252 | 421 | 1.5E-34 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1449 | 1589 | 9.6E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1282 | 1447 | 7.7E-33 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1290 | 1589 | 3.2E-88 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1268 | 1588 | 54.391495 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1612 | 1651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1622 | 1637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1118 | 1138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 105 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_010312807.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Solanum lycopersicum] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A6N2BPE0 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Solanum chilense OX=4083 GN=EJD97_008638 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology