Basic Information
Locus ID:
SOLCI002417700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2273 | 38805 | 47071 | + | SOLCI002417700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 106,106.69 Da | 34.65 | 96.34 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 627 | 893 | 1.2941E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 1.2E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 624 | 890 | 4.6E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 294 | 1.25E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 606 | 917 | 1.37E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 592 | 696 | 5.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 290 | 3.6E-60 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 697 | 911 | 1.6E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 435 | 2.5E-9 | IPR032675 |
| SMART | SM00220 | serkin_6 | 621 | 893 | 1.0E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 621 | 897 | 38.378769 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 627 | 649 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015055885.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Solanum pennellii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2BLL1 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008556 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology