Basic Information
Locus ID:
SOLCI002417600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2273 | 13425 | 24973 | + | SOLCI002417600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 96,090.88 Da | 39.26 | 93.02 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 548 | 812 | 4.65073E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 545 | 809 | 1.2E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 529 | 849 | 4.18E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 301 | 8.5E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 618 | 818 | 5.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 516 | 617 | 2.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 280 | 3.6E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 152 | 1.3E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 231 | 255 | 4.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 160 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 208 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 40 | 64 | 70.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 542 | 802 | 2.1E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 542 | 815 | 38.915863 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 548 | 570 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 662 | 674 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 231 | 244 | 9.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 187 | 200 | 9.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37450.4 | - | 0 |
| RefSeq | XP_015055886.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Solanum pennellii] | 0 |
| C0LGU1 | Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BLT0 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology