halophFGD

Basic Information

Locus ID: SOLCI002349100

Species & Taxonomic ID: Solanum chilense & 4083

Genome Assembly: GCA_006013705.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold2226	85614	86720	-	SOLCI002349100

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.11	33,830.53 Da	43.48	92.01	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	34	296	2.6E-33	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	33	295	9.56E-52	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	105	303	2.1E-41	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	24	103	5.6E-17	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	29	304	28.089218	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	35	57	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G48480.1	receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene
RefSeq	XP_015084644.1	probable inactive receptor kinase At1g48480 [Solanum pennellii]
Swiss-Prot	Q9LP77	Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1
TrEMBL	A0A6N2BJV6	Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008323 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0102919
Poaceae	Triticum aestivum	1	TraesCS2B02G538300.1
Solanaceae	Solanum chilense	1	SOLCI002349100
Solanaceae	Solanum pennellii	1	gene-LOC107028108