Basic Information
Locus ID:
SOLCI002308500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold2200 | 74283 | 76283 | - | SOLCI002308500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 74,741.21 Da | 43.00 | 84.88 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 352 | 620 | 6.87465E-98 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 24 | 250 | 9.64915E-86 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 346 | 615 | 1.1E-49 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 24 | 251 | 5.1E-63 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 255 | 2.1E-64 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 638 | 6.07E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 421 | 7.0E-29 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 21 | 253 | 1.1E-69 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 636 | 3.8E-63 | - |
| SMART | SM00220 | serkin_6 | 346 | 626 | 2.8E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 626 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 468 | 480 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 375 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 135 | 141 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | NP_001307979.1 | clade XIV lectin receptor kinase precursor [Solanum lycopersicum] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2BSN5 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008139 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology